Rfam 10.0 - RNA World performance

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Michael H.W. Weber
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Rfam 10.0 - RNA World performance

#1 Ungelesener Beitrag von Michael H.W. Weber » 14.08.2010 16:16

As announced, I have fed the second set of CMCALIBRATE WUs into the RNA World server - these are based on the latest version of Rfam (10.0). There are some demanding WUs among these. 8)

For comparison: To my knowledge, the Rfam project team needs 5 months for the calibration of Rfam 10.0 using their dedicated HPC cluster. We have completed 50% of that work now within almost 12 days. And please note that we employ only a tiny fraction of RNA Worlds computational power to these calibrations, i.e. only some of the active x64 Linux systems. Moreover, we always use the latest INFERNAL version. From this we can see that RNA World does quite well. And it should be mentioned that, thanks to our dedicated participants (YOU), our compute power increases daily as can be seen on our server status page. I think this is a nice statement - so to say just in time for a hopefully equally nice weekend. :wink:

Michael.
Fördern, kooperieren und konstruieren statt fordern, konkurrieren und konsumieren.

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