JeromeC hat geschrieben:WONDERFUL after 200 or 300 hours of processing time and reaching almost 30% of calculation, restraining the Mac from rebooting (even though 2 apps already want that, but I was waiting), I came home today and...
Lun 15 avr 15:27:32 2013 | RNA World | Task cms_GA-p[e20-30MB_Lin64s]_1_Drosophila-yakuba_CM000160.lin.EMBL_RF00177_SSU_rRNA_5_1340128624_30357_7 exited with zero status but no 'finished' file
Lun 15 avr 15:27:32 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Lun 15 avr 15:28:05 2013 | RNA World | Restarting task cms_GA-p[e20-30MB_Lin64s]_1_Drosophila-yakuba_CM000160.lin.EMBL_RF00177_SSU_rRNA_5_1340128624_30357_7 using cmsearch version 30 in slot 10
GREAT ! Now 3% completed after 6 fantastic new hours of calculation.
Obviously I just abandoned it, enough calculation hours thrown to the bin. The next so called long running WU will have the same destiny.
Ok so time went by, then
another big WU coming, ok let's give it a try, and I had not done a close follow up of this task, I had suspended it a few time (with keep in memory option) and I though it had run maybe 70 hours of calculation, but today I realize it was not the case at all, I searched all the log history and this is what happened (again) :
Sam 11 mai 21:04:05 2013 | RNA World | Starting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Jeu 16 mai 19:51:53 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Jeu 16 mai 19:51:53 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Jeu 16 mai 19:51:53 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Ven 17 mai 01:58:39 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Ven 17 mai 01:58:39 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Ven 17 mai 01:58:39 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Ven 17 mai 21:33:39 2013 | RNA World | task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 suspended by user
(note : I have the option to keep in memory when suspended)
Dim 19 mai 01:11:47 2013 | RNA World | work fetch resumed by user
Dim 19 mai 01:11:59 2013 | RNA World | task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 resumed by user
Dim 19 mai 01:12:00 2013 | RNA World | Resuming task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Lun 20 mai 09:07:01 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Lun 20 mai 09:07:01 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Lun 20 mai 09:07:01 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Lun 20 mai 09:15:40 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Lun 20 mai 09:15:40 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Lun 20 mai 09:15:40 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Mar 21 mai 11:36:30 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Mar 21 mai 11:36:30 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Mar 21 mai 11:36:30 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Mar 21 mai 18:41:17 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Mar 21 mai 18:41:17 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Mar 21 mai 18:41:17 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Mar 21 mai 19:56:09 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Mar 21 mai 19:56:09 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Mar 21 mai 19:56:09 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Mar 21 mai 20:20:34 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Mar 21 mai 20:20:34 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Mar 21 mai 20:20:34 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Mar 21 mai 20:26:27 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Mar 21 mai 20:26:27 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Mar 21 mai 20:26:27 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Mar 21 mai 20:31:10 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Mar 21 mai 20:31:10 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Mar 21 mai 20:31:10 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Mar 21 mai 20:41:12 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Mar 21 mai 20:41:12 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Mar 21 mai 20:41:12 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Mar 21 mai 21:05:46 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Mar 21 mai 21:05:46 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Mar 21 mai 21:05:46 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
Mar 21 mai 21:11:08 2013 | RNA World | Task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 exited with zero status but no 'finished' file
Mar 21 mai 21:11:08 2013 | RNA World | If this happens repeatedly you may need to reset the project.
Mar 21 mai 21:11:08 2013 | RNA World | Restarting task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 using cmsearch version 30 in slot 10
So VERY sadly :
Mar 21 mai 21:39:41 2013 | RNA World | task cms_GA-p[b-Lin64f-2]_1_Streptococcus-mutans-UA159_AE014133.cir.EMBL_RF00028_Intron_gpI_1358679723_1849_6 aborted by user
I'm done with RNA long WU, really not reliable enough, so many hours of calculation lost in space...