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von robertmiles
16.09.2012 17:43
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

... And must finish on 9-22. Impossible. It's almost 100 days... ... If I understand that right, this "9-22" is the deadline. and the 100 days are the estimated runtime. Post the workunit ID here and Yoyo will enhance the deadline so you will have your 100 days. The workunit ID can be found in your...
von robertmiles
15.09.2012 05:39
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

9/14/2012 7:57:21 PM | RNA World | task cms_GA-p[e30-50MB_Lin64f]_1_Danio-rerio-(zebrafish)_CU651622.lin.EMBL_RF00028_Intron_gpI_1330438623_30212_14 resumed by user This task is taking too much... 2306 hours ETA. And must finish on 9-22. Impossible. It's almost 100 days... What can I do, besides ab...
von robertmiles
03.09.2012 09:53
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

Another possibility to consider: For the long XXL workunits, don't count "Aborted by user" as an error, or count it as only a small fraction of an error.
von robertmiles
30.08.2012 16:50
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

Task ID 14587144 looks like it will need extra time to finish. http://www.rnaworld.de/rnaworld/result.php?resultid=14587144 cms_GA-p[e5-20MB_Lin64f]_1_Gallus-gallus-(chicken)_CM000111.lin.EMBL.RF00028_Intron_gpI_1323120445_42560 It arrived say that it would need about 385 hours to finish, but it's a...
von robertmiles
27.08.2012 18:10
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

WU cms_GA-p[e30-50MB_Lin64f]_1_Dani-rerio-(zebrafish)_CU651613.lin.EMBL_RF00028_Intron_gpl_1330438623_21980_11 is currently sitting at 4407 hours remaining after 12 hours of cpu run time. Is this a normal sized WU or is something amiss ? Computer is a AMD Phenom 8550 x3 core@2.2 ghz 5% oc with 6 gi...
von robertmiles
17.08.2012 15:16
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

My copy of workunit 6000664 is now Completed, can't validate, apparantly due to the large number of users who aborted their copies. Do the
limits on number of copies for this workunit need adjusting so that more people can try it?
von robertmiles
08.08.2012 07:04
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

Workunit 6000664 didn't finish as expected. Instead, it reached 100% progress and kept going. I'll let it run some more, though - I haven't decided how much.
von robertmiles
08.08.2012 04:29
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

Workunit 6000664 cmsearch XXL (long) 1.0.2.0.30 cms_GA-p[e5-20MB_Lin64f]_1_Ornithorhynchus-anatinus-(platypus)_CM000426.lin.EMBL_RF00028_Intron _gpI_1328586124_67256 This workunit should finish in about an hour. Once you have one successful completion, you may want to think about whether more copies...
von robertmiles
06.08.2012 01:59
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

One other my last two very long workunits already finished last week. The other appears to have survived the suspend - sleep mode - restart for the wedding trip, and will probably finish in about two more days. Workunit 6000664 looks like you may need to decide if more users should be allowed to try...
von robertmiles
28.07.2012 02:10
Forum: RNA World Discussions (english)
Thema: Problem with xxl wu
Antworten: 15
Zugriffe: 5364

Re: Problem with xxl wu

I have a few Cygwin versions of MinGW already installed, so the compilers look likely to match well enough. For the make files, it now looks like any of the Cygwin programs for viewing text files with Linux line endings would be the best choice. It now looks like I need to download the source code b...
von robertmiles
24.07.2012 07:03
Forum: RNA World Discussions (english)
Thema: Problem with xxl wu
Antworten: 15
Zugriffe: 5364

Re: Problem with xxl wu

I'm using Cygwin under Windows, which should be able to handle SOME of the Linux/Windows differences.

One problem is that I haven't found a way to view its make files yet.
von robertmiles
19.07.2012 16:15
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1054
Zugriffe: 257947

Re: Long running work unit

This workunit started over last night, so It looks like I'll need about two extra weeks for another try: http://www.rnaworld.de/rnaworld/result.php?resultid=14564885 I've requested and received more time on another workunit earlier. It looks like I'll need to try a sleep mode not-quite-checkpoint on...

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