Die Suche ergab 5 Treffer

von FalconFly
29.05.2010 08:21
Forum: RNA World Discussions (english)
Thema: cmsearch 0.13 run time
Antworten: 12
Zugriffe: 2993

Re: cmsearch 0.13 run time

IMHO several workunits are still way too unstable for mass production. Add to that the lack of checkpoints and you're asking for a whole lot of frustration (unprepared users) and resulting troubles. I just wasted another ~500 hours of cpu time over hung workunits I'd rather had invested in something...
von FalconFly
07.03.2010 10:11
Forum: RNA World Discussions (english)
Thema: cmcalibrate 0.21 win32/64 lin32/64
Antworten: 36
Zugriffe: 6482

Re: cmcalibrate 0.21 win32/64 lin32/64

Does that mean extremely long-running cmcalibrate 0.20 WorkUnits (like #157707) should be aborted ?
(right now it's still running on two Systems but will likely take at least one more month to complete despite being far beyond its deadline (!) )
von FalconFly
28.02.2010 18:44
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1068
Zugriffe: 270548

Re: Long running work unit

Okidok, I'll let them run.
It'll be at least 4 weeks before they can finish, however - 19h done, ~650h to go :roll:

(I wonder what kind of calibration is done that needs such enormous runtimes?)
von FalconFly
28.02.2010 09:30
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1068
Zugriffe: 270548

Re: Long running work unit

With me that wasn't the case I think (at least not yesterday when I checked on both machines). cmcalibrate RAM uses only ~700MB, currently running along WCG (only 30MB per Task) and leaving some 2.8GB RAM free and 2GB Swap unused. Even if cmcalibrate went up to 3.5GB, there still would be no impact ...
von FalconFly
27.02.2010 23:45
Forum: RNA World Discussions (english)
Thema: Long running work unit
Antworten: 1068
Zugriffe: 270548

Re: Long running work unit

I also have two WorkUnits ( example ) that could not finish within the deadline. Both take approx. 670hrs on a 2.5GHz Phenom II X4 905e, which isn't quite a slow CPU. x86_64 Linux reports normal CPU usage, Task is running normal. As the deadline is already blown, should I abort those or should I wai...

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